Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820820.1_cds_XP_016500555.1_14371
CDS Infomation

[gene=LOC107818988] [db_xref=GeneID:107818988] [protein=protein TRANSPORT INHIBITOR RESPONSE 1-like] [protein_id=XP_016500555.1] [location=complement(join(69011..69808,70502..70994,72542..72996))] [gbkey=CDS]
Sequence

ATGGCGTACTCATTCCCGGAAGAAGTTTTAGAACACGTGTTCTCCTTCCTCAGCTCCGAC
CAGGACCGGAACTCCGTATCCTTAGTCTGCAAATCATGGTACGAGATCGAACGCTGGTGT
CGGAGGAGAATCTTCGTCGGAAACTGCTACGCCGTGAGCCCTAGCCTCATGATCCGACGG
TTCCCAGAAGTCAGATCTGTAGAGTTAAAAGGAAAACCTCATTTTGCTGACTTCAATCTG
GTCCCTGAAGGTTGGGGTGCTTACGTGCACCCTTGGATTGTGGCTATGTCTAGGTCTTAC
CCTTGGCTTGAGGAAATTAGGCTTAAGCGTATGGTAATTACGGATGAGTCCTTGGAGTTG
ATTTCTAAGTCGTTTAAGAACTTCAAGGTGCTAGTTTTGTCTTCTTGCGATGGTTTTACT
ACTGATGGTCTTGCTTCTATTGCCGCTAATTGCAGGAATATTAGAGAACTGGACTTGGGA
GAGAGTGAAGTGGAGGACCTTAGTGGACATTGGCTTAGCCATTTTCCTGATAGCTGCACA
TCACTTGTTTCACTTAACATTGCCTGTTTGGCTTCTGAGATCAGTTTCTTAGCTTTGGAG
CGTTTGGTTGCCCGCTCTCCTAATTTGAGGACTCTTCGGATAAATCGTGCTGTACCCCTT
GAGAAGCTTCCGAATCTGCTTCGCCACGCTTCTCAGTTGATTGAATTTGGTACAGGCGCC
TACTCCGCTGATGTACGGTCTGATGTCTTCTCAAACCTGACAGAAGCTTTTTCAGGCTGC
AAGCAACTTAAAGGCTTGTCTGGGTTTTGGGATGTTGTTCCGGCTTACCTTCCAGCTATA
TATCCTGTTTGCTCCAGACTCACCTCTTTAAATTTGAGCTATGCTACCAGTCAAAACCCT
GACCTTGGCAAGCTCATAAGTCAGTGTCACAACTTGCAGCGGTTGTGGGTGCTAGACTAC
ATTGAAGATATTGGTCTTGAGGAACTTGCTGCCAATTGTAAGGACCTTCAAGAGCTGAGG
GTGTTTCCTTCTGATCCTTTTGCTCCTGAACCAAATGCAACCTTGACGGAGCAAGGCCTT
GTAGCTGTCTCAGATGGCTGCCCAAAGCTCCAGTCTGTTTTATACTTCTGCCGTCAAATG
ACAAATGCAGCTTTAGTTACTATTGCTAGGAATCGTCCTAACATGATTCGTTTTCGCTTG
TGTATTATTGAGCCTCGAAGTCCCGATTACTTAACTCTTGGGCCGCTTGATACTGGTTTT
GGGGCCATTGTGGAGAACTGTAAAGAATTGCGGCGACTTTCACTTTCTGGCCTCCTTACT
GATCGTGTCTTTGAGTACATAGGGACCCATGCTAAAAAGTTAGAGATGCTTTCCATAGCT
TTTGCTGGGGACAGCGATTTGGGACTCCACCATGTACTCTCTGGCTGTGAAAGCCTCCGG
AAGTTGGAGATCAGAGATTGTCCCTTTGGAGACAAGGCTCTCTTGGCCAATGCTGCAAAG
CTTGAGACAATGCGATCCCTTTGGATGTCTTCTTGTTCAGTAAGTTTTGGAGCATGTAAG
CTGCTAGCTCAAAAGATTCCTAGGCTTAATGTTGAAGTCATAGATGAGAGGGGTCCTCCA
GATACAAGGCCAGAAAGCTGCCCTGTAGAAAAACTTTACATATATCGAACAGTGGCTGGA
CCGAGGTTTGACACGCCTGGTTTTGTTTGGAGAATGGATGAAGATACAGCAGTGAGATTG
TCTTGA

Peptide Sequence

PEP ID

XP_016500555.1
PEP Infomation

PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Nicotiana tabacum]
Sequence

MAYSFPEEVLEHVFSFLSSDQDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSLMIRR
FPEVRSVELKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEISFLALERLVARSPNLRTLRINRAVPLEKLPNLLRHASQLIEFGTGA
YSADVRSDVFSNLTEAFSGCKQLKGLSGFWDVVPAYLPAIYPVCSRLTSLNLSYATSQNP
DLGKLISQCHNLQRLWVLDYIEDIGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRSPDYLTLGPLDTGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRTVAGPRFDTPGFVWRMDEDTAVRLS

Transcript Sequence

Gene sequence data has not been registered.